Welcome to BioImageIT Core’s documentation!

Contents:

• Introduction
  • Context
  • What bioimageit_core is
• Guide
  • Data Management
  • Process Running
  • Further reading
• Install
  • Install bioimageit_core
  • Install toolboxes
  • Configure bioimageit_core
• Tutorial: wrap a tool
  • Shed file
  • Wrapper
  • Packaging and dependencies
  • Summary
• Tutorial: write a data plugin
  • Plugin info
  • Data service builder
  • Data service
  • Register the service
  • Summary
• Tutorial: write a runner plugin
  • Runner service builder
  • Runner service
  • Register the runner
  • Summary
• bioimageit_core
  • bioimageit_core package

Indices and tables

• Index

• Module Index

• Search Page